SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_200800062
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr17:43231479-43252446
Size: 20967
Super-enhancer rank 62
Number of SE elements: 5
ChIP density(Case|Control): 45949.1805|8768.3994
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNU2-1 ;
ROSE Overlap RNU2-1 ;
ROSE Proximal TMEM106A ; LINC00854 ;
ROSE Closest RNU2-1 ;
Lasso ;
PreSTIGE ;
ABC HEXIM2 ; LOC105371795 ; PLCD3 ; ACBD4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800062 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers