SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_200800054
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr18:3446818-3459616
Size: 12798
Super-enhancer rank 54
Number of SE elements: 1
ChIP density(Case|Control): 41955.6834|1917.1404
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TGIF1 ;
ROSE Overlap TGIF1 ;
ROSE Proximal TGIF1 ; GAPLINC ;
ROSE Closest TGIF1 ;
Lasso ;
PreSTIGE ;
ABC LOC104968399 ; MYL12A ; MYL12B ; METTL4 ; NDC80 ; TGIF1 ; GAPLINC ; EMILIN2 ; LPIN2 ; DLGAP1-AS2 ; DLGAP1-AS1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800054 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers