SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_200800029
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Ewing sarcoma
Biosample name: A673 ETV6 dTAG cells - 6 hour DMSO treated
Genomic region: chr1:156070044-156138697
Size: 68653
Super-enhancer rank 29
Number of SE elements: 15
ChIP density(Case|Control): 58107.8992|8204.0335
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LMNA ;
ROSE Overlap LMNA ; MEX3A ; RAB25 ;
ROSE Proximal LAMTOR2 ; UBQLN4 ; SEMA4A ; SSR2 ; LMNA ;
ROSE Closest LMNA ;
Lasso ;
PreSTIGE ;
ABC MEX3A ; LMNA ; PAQR6 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_200800029 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers