SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_198401735
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562-untreated
Genomic region: chr5:638256-690966
Size: 52710
Super-enhancer rank 1735
Number of SE elements: 18
ChIP density(Case|Control): 11311.566|5191.935
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TPPP ;
ROSE Overlap CEP72 ; TPPP ;
ROSE Proximal LOC100996325 ;
ROSE Closest TPPP ;
Lasso ;
PreSTIGE ;
ABC CEP72 ; LOC100996325 ; SLC9A3-AS1 ; TPPP ; ZDHHC11 ; BRD9 ; PP7080 ; EXOC3 ; EXOC3-AS1 ; LOC728613 ; SDHAP3 ; LPCAT1 ; LINC01511 ; TERT ; SLC6A19 ; CTD-3080P12.3 ; LOC100506688 ; TRIP13 ; HRAT5 ; PDCD6 ; CLPTM1L ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198401735 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers