SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_198401613
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562-untreated
Genomic region: chr4:38580687-38634629
Size: 53942
Super-enhancer rank 1613
Number of SE elements: 15
ChIP density(Case|Control): 11473.4634|5022.0002
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KLF3 ;
ROSE Overlap KLF3-AS1 ;
ROSE Proximal KLF3 ;
ROSE Closest KLF3 ;
Lasso ;
PreSTIGE ;
ABC KLF3 ; TLR1 ; KLF3-AS1 ; LINC01258 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198401613 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers