SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_198401393
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562-untreated
Genomic region: chr1:205783046-205810967
Size: 27921
Super-enhancer rank 1393
Number of SE elements: 14
ChIP density(Case|Control): 10707.7035|3478.9566
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC41A1 ;
ROSE Overlap SLC41A1 ;
ROSE Proximal NUCKS1 ; RAB29 ; PM20D1 ;
ROSE Closest SLC41A1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198401393 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers