SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_198401379
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562-untreated
Genomic region: chr4:8278520-8310308
Size: 31788
Super-enhancer rank 1379
Number of SE elements: 13
ChIP density(Case|Control): 9695.34|2409.5304
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HTRA3 ;
ROSE Overlap HTRA3 ;
ROSE Proximal ;
ROSE Closest HTRA3 ;
Lasso ;
PreSTIGE ;
ABC AFAP1-AS1 ; ABLIM2 ; SH3TC1 ; ACOX3 ; TRMT44 ; CPZ ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198401379 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers