SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_198400613
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562-untreated
Genomic region: chr19:50725208-50778455
Size: 53247
Super-enhancer rank 613
Number of SE elements: 26
ChIP density(Case|Control): 18503.3325|5409.8952
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPR32 ;
ROSE Overlap GPR32 ; CLEC11A ;
ROSE Proximal MGC45922 ; SNORD88C ; SNORD88B ; SHANK1 ; KLK1 ; C19orf48 ; ACPT ; SNORD88A ;
ROSE Closest GPR32 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198400613 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers