SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_198400564
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562-untreated
Genomic region: chr1_GL383519v1_alt:11234-106684
Size: 95450
Super-enhancer rank 564
Number of SE elements: 25
ChIP density(Case|Control): 18440.94|4715.23
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ;
ROSE Overlap MTX1 ; PKLR ; HCN3 ; CLK2 ; GBA ; GBAP1 ; SCAMP3 ; FAM189B ;
ROSE Proximal ;
ROSE Closest MTX1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198400564 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers