SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_198400524
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562-untreated
Genomic region: chr3:72113551-72203913
Size: 90362
Super-enhancer rank 524
Number of SE elements: 21
ChIP density(Case|Control): 20629.6446|6072.3264
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC00870 ;
ROSE Overlap LINC00870 ;
ROSE Proximal LINC00877 ;
ROSE Closest LINC00870 ;
Lasso ;
PreSTIGE ;
ABC LINC00870 ; RYBP ; SHQ1 ; GXYLT2 ; PPP4R2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198400524 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers