SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_198400438
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562-untreated
Genomic region: chr1:11785596-11803435
Size: 17839
Super-enhancer rank 438
Number of SE elements: 1
ChIP density(Case|Control): 18343.8437|2122.841
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLCN6 ;
ROSE Overlap MTHFR ; C1orf167 ;
ROSE Proximal LOC102724659 ; AGTRAP ; NPPA ; NPPA-AS1 ; CLCN6 ;
ROSE Closest CLCN6 ;
Lasso ;
PreSTIGE ;
ABC AGTRAP ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198400438 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers