SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_198400231
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562-untreated
Genomic region: chr17:42340662-42458741
Size: 118079
Super-enhancer rank 231
Number of SE elements: 42
ChIP density(Case|Control): 35955.0555|13354.7349
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: STAT3 ;
ROSE Overlap PTRF ; STAT3 ;
ROSE Proximal MIR548AT ; ATP6V0A1 ;
ROSE Closest STAT3 ;
Lasso ;
PreSTIGE ;
ABC SLC4A1 ; RUNDC3A ; SLC25A39 ; GRN ; RUNDC3A-AS1 ; FAM171A2 ; UBTF ; ATXN7L3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198400231 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers