SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_198400075
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562-untreated
Genomic region: chr4:6871099-7035278
Size: 164179
Super-enhancer rank 75
Number of SE elements: 70
ChIP density(Case|Control): 53259.6676|16828.3475
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TBC1D14 ;
ROSE Overlap TBC1D14 ; KIAA0232 ; LOC100129931 ;
ROSE Proximal TADA2B ; CCDC96 ; GRPEL1 ;
ROSE Closest TBC1D14 ;
Lasso ;
PreSTIGE ;
ABC GRPEL1 ; TADA2B ; CCDC96 ; TBC1D14 ; KIAA0232 ; BLOC1S4 ; MRFAP1L1 ; S100P ; LOC93622 ; LOC105374366 ; MAN2B2 ; FLJ36777 ; AFAP1-AS1 ; CPZ ; SH3TC1 ; ABLIM2 ; MRFAP1 ; LOC285484 ; EVC ; JAKMIP1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198400075 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers