SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_198200520
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: blood
Biosample name: Hut78-untreated
Genomic region: chr1:24478759-24510835
Size: 32076
Super-enhancer rank 520
Number of SE elements: 5
ChIP density(Case|Control): 14286.6504|3916.4796
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RCAN3 ;
ROSE Overlap RCAN3 ; RCAN3AS ;
ROSE Proximal RCAN3 ; RCAN3AS ; LOC100506985 ; NCMAP ;
ROSE Closest RCAN3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_198200520 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers