SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_184900801
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: trophoblast
Biosample name: CT27,EVT
Genomic region: chr4:140037124-140099615
Size: 62491
Super-enhancer rank 801
Number of SE elements: 20
ChIP density(Case|Control): 39538.0557|6580.3023
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAML3 ;
ROSE Overlap MAML3 ;
ROSE Proximal ;
ROSE Closest MAML3 ;
Lasso ;
PreSTIGE ;
ABC PCDH18 ; SLC7A11 ; NOCT ; ELF2 ; NAA15 ; NDUFC1 ; RAB33B ; RNF150 ; TBC1D9 ; UCP1 ; ELMOD2 ; CLGN ; SCOC ; SETD7 ; MGST2 ; SCOC-AS1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_184900801 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers