SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_171600520
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: blood
Biosample name: K562 clone 16h 10uM Tubastatin A
Genomic region: chr6:4010303-4023568
Size: 13265
Super-enhancer rank 520
Number of SE elements: 2
ChIP density(Case|Control): 31972.6295|2501.779
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRPF4B ;
ROSE Overlap PRPF4B ;
ROSE Proximal ;
ROSE Closest PRPF4B ;
Lasso ;
PreSTIGE ;
ABC SLC22A23 ; PPP1R3G ; LOC100507506 ; ECI2 ; FAM50B ; PRPF4B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_171600520 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers