SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_171600056
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: blood
Biosample name: K562 clone 16h 10uM Tubastatin A
Genomic region: chrX:48764900-48814407
Size: 49507
Super-enhancer rank 56
Number of SE elements: 9
ChIP density(Case|Control): 76735.85|4237.7992
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GATA1 ;
ROSE Overlap HDAC6 ; GATA1 ; GLOD5 ;
ROSE Proximal ERAS ; PCSK1N ;
ROSE Closest GATA1 ;
Lasso ;
PreSTIGE ;
ABC SLC35A2 ; PIM2 ; SSX1 ; PQBP1 ; TIMM17B ; GRIPAP1 ; TFE3 ; WDR45 ; KCND1 ; OTUD5 ; WAS ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_171600056 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers