SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_171500573
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: blood
Biosample name: K562 clone 16h 100nM PCI-24781
Genomic region: chr16:3004736-3009419
Size: 4683
Super-enhancer rank 573
Number of SE elements: 1
ChIP density(Case|Control): 23019.2865|874.7844
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLDN9 ;
ROSE Overlap ;
ROSE Proximal LOC100128770 ; PKMYT1 ; MMP25-AS1 ; THOC6 ; CCDC64B ; CLDN9 ; MMP25 ; LOC101929613 ; TNFRSF12A ; CLDN6 ; PAQR4 ; KREMEN2 ; HCFC1R1 ; LINC00514 ;
ROSE Closest CLDN9 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_171500573 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers