SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_171500373
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: blood
Biosample name: K562 clone 16h 100nM PCI-24781
Genomic region: chr12:54384338-54394381
Size: 10043
Super-enhancer rank 373
Number of SE elements: 1
ChIP density(Case|Control): 29277.3536|1468.2866
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZNF385A ;
ROSE Overlap LOC102724050 ; ZNF385A ;
ROSE Proximal ITGA5 ; GPR84 ; LOC102724050 ; MIR148B ;
ROSE Closest ZNF385A ;
Lasso ;
PreSTIGE ;
ABC HOXC9 ; HOXC-AS1 ; HOXC-AS2 ; HOXC-AS3 ; HOXC10 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_171500373 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers