SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_171500143
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: blood
Biosample name: K562 clone 16h 100nM PCI-24781
Genomic region: chr6:41934741-41943779
Size: 9038
Super-enhancer rank 143
Number of SE elements: 1
ChIP density(Case|Control): 43676.135|2179.0618
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCND3 ;
ROSE Overlap CCND3 ;
ROSE Proximal USP49 ; BYSL ; MED20 ;
ROSE Closest CCND3 ;
Lasso ;
PreSTIGE ;
ABC CCND3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_171500143 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers