SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200628
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr19:49874996-49879518
Size: 4522
Super-enhancer rank 628
Number of SE elements: 1
ChIP density(Case|Control): 18944.4668|305.6872
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AKT1S1 ;
ROSE Overlap AKT1S1 ; TBC1D17 ;
ROSE Proximal MIR6800 ; MIR4750 ; ATF5 ; PTOV1-AS2 ; PTOV1-AS1 ; IL4I1 ; MIR4749 ; NUP62 ; PTOV1 ; PNKP ;
ROSE Closest AKT1S1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200628 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers