SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200625
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr12:123361421-123390364
Size: 28943
Super-enhancer rank 625
Number of SE elements: 6
ChIP density(Case|Control): 20633.4647|1956.5468
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SETD8 ;
ROSE Overlap SETD8 ; MIR8072 ;
ROSE Proximal SBNO1 ; RILPL2 ;
ROSE Closest SETD8 ;
Lasso ;
PreSTIGE ;
ABC TCTN2 ; ARL6IP4 ; MPHOSPH9 ; C12orf65 ; CDK2AP1 ; SBNO1 ; RILPL2 ; SNRNP35 ; ZNF664 ; RFLNA ; CCDC92 ; ATP6V0A2 ; RILPL1 ; LOC101927415 ; TMED2 ; DENR ; HIP1R ; VPS37B ; IL31 ; ZCCHC8 ; RSRC2 ; EIF2B1 ; GTF2H3 ; KNTC1 ; DDX55 ; ABCB9 ; OGFOD2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200625 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers