SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200618
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr11:118781738-118793726
Size: 11988
Super-enhancer rank 618
Number of SE elements: 3
ChIP density(Case|Control): 19848.5316|1094.5044
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DDX6 ;
ROSE Overlap DDX6 ;
ROSE Proximal ;
ROSE Closest DDX6 ;
Lasso ;
PreSTIGE ;
ABC MPZL2 ; MPZL3 ; SCN2B ; SCN4B ; TMPRSS4 ; IL10RA ; SIK3 ; PAFAH1B2 ; RNF214 ; PCSK7 ; BACE1 ; CEP164 ; FXYD6-FXYD2 ; FXYD6 ; TMPRSS13 ; LOC100652768 ; TAGLN ; SIDT2 ; THY1 ; USP2-AS1 ; USP2 ; RNF26 ; MCAM ; CBL ; CCDC153 ; NLRX1 ; ABCG4 ; HINFP ; C2CD2L ; DPAGT1 ; H2AFX ; HMBS ; VPS11 ; HYOU1 ; SLC37A4 ; TRAPPC4 ; RPS25 ; OAF ; LOC102724301 ; NECTIN1 ; LOC101929089 ; TTC36 ; KMT2A ; ATP5L ; UBE4A ; TMEM25 ; IFT46 ; ARCN1 ; PHLDB1 ; TREH ; DDX6 ; CXCR5 ; BCL9L ; UPK2 ; CCDC84 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200618 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers