SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200550
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr16:89908134-89934423
Size: 26289
Super-enhancer rank 550
Number of SE elements: 6
ChIP density(Case|Control): 23339.3742|2681.478
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TUBB3 ;
ROSE Overlap TUBB3 ; MC1R ; TCF25 ;
ROSE Proximal CENPBD1 ; AFG3L1P ; DEF8 ;
ROSE Closest TUBB3 ;
Lasso ;
PreSTIGE ;
ABC TCF25 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200550 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers