SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200538
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr1:27327858-27367687
Size: 39829
Super-enhancer rank 538
Number of SE elements: 10
ChIP density(Case|Control): 24072.6476|3034.9698
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SYTL1 ;
ROSE Overlap TMEM222 ; SYTL1 ; MAP3K6 ;
ROSE Proximal TMEM222 ; ACTG1P20 ; MAP3K6 ; GPR3 ; CD164L2 ; FCN3 ; RNU6-48P ;
ROSE Closest SYTL1 ;
Lasso ;
PreSTIGE ;
ABC FAM46B ; TRNP1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200538 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers