SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200494
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr22:37592230-37649066
Size: 56836
Super-enhancer rank 494
Number of SE elements: 12
ChIP density(Case|Control): 25871.7472|3927.3676
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GGA1 ;
ROSE Overlap LOC101927051 ; GGA1 ; SH3BP1 ;
ROSE Proximal NOL12 ; LGALS2 ; PDXP ; TRIOBP ; LGALS1 ; CDC42EP1 ;
ROSE Closest GGA1 ;
Lasso ;
PreSTIGE ;
ABC TST ; LL22NC01-81G9.3 ; IFT27 ; MPST ; KCTD17 ; IL2RB ; C1QTNF6 ; RAC2 ; CYTH4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200494 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers