SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200469
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr3:65939773-65972385
Size: 32612
Super-enhancer rank 469
Number of SE elements: 7
ChIP density(Case|Control): 26135.2568|3420.9988
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAGI1 ;
ROSE Overlap MAGI1 ;
ROSE Proximal MAGI1-AS1 ;
ROSE Closest MAGI1-AS1 ;
Lasso ;
PreSTIGE ;
ABC PRICKLE2-AS1 ; PRICKLE2 ; MAGI1-IT1 ; KBTBD8 ; MAGI1 ; LRIG1 ; SLC25A26 ; SUCLG2 ; SUCLG2-AS1 ; PSMD6-AS2 ; PSMD6 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200469 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers