SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200414
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr16:758508-763703
Size: 5195
Super-enhancer rank 414
Number of SE elements: 1
ChIP density(Case|Control): 24414.9415|497.681
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MSLN ;
ROSE Overlap MSLN ;
ROSE Proximal PRR25 ; METRN ; FAM173A ; MIR662 ; HAGHL ; CCDC78 ; RPUSD1 ; CHTF18 ; NARFL ; GNG13 ;
ROSE Closest MSLN ;
Lasso ;
PreSTIGE ;
ABC FBXL16 ; METRN ; FAM173A ; PRR25 ; GNG13 ; CCDC78 ; CHTF18 ; RPUSD1 ; MSLN ; NARFL ; HAGHL ; STUB1 ; JMJD8 ; WDR24 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200414 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers