SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200370
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr16:3018857-3025299
Size: 6442
Super-enhancer rank 370
Number of SE elements: 1
ChIP density(Case|Control): 25690.696|449.0074
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNFRSF12A ;
ROSE Overlap THOC6 ; TNFRSF12A ; HCFC1R1 ;
ROSE Proximal LOC100128770 ; PAQR4 ; CLDN9 ; PKMYT1 ; IL32 ; MMP25 ; LINC00514 ; MMP25-AS1 ; CLDN6 ; LOC101929613 ; HCFC1R1 ; CCDC64B ;
ROSE Closest TNFRSF12A ;
Lasso ;
PreSTIGE ;
ABC KREMEN2 ; PAQR4 ; PKMYT1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200370 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers