Super-enhancer overview
| SE ID: | SE_02_170200340 |
| Species: | Human |
| Data source: | NCBI GEO/SRA |
| Biosample type: | Cell line |
| Tissue type: | colon |
| Biosample name: | HCT116 KI1_ChIP_Fig4 |
| Genomic region: | chr5:141512222-141525658 |
| Size: | 13436 |
| Super-enhancer rank | 340 |
| Number of SE elements: | 3 |
| ChIP density(Case|Control): | 27288.516|1026.5104 |
| Genome browser: | 
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Super-enhancer annotation
eQTL
eRNA1~5
5~10
10~MAX
Super-enhancer associated genes
| Strategies/Algorithm | Gene name |
| The closest active: | LOC100505658 ; |
| ROSE Overlap | PCDHGB5 ; PCDHGB1 ; PCDHGC4 ; PCDHGA1 ; PCDHGA6 ; PCDHGB2 ; PCDHGA2 ; PCDHGA4 ; PCDHGB3 ; PCDHGC3 ; PCDHGA3 ; PCDHGA11 ; PCDHGA8 ; PCDHGA10 ; PCDHGA12 ; PCDHGA9 ; PCDHGB6 ; PCDHGA7 ; PCDHGC5 ; PCDHGB7 ; DIAPH1 ; PCDHGA5 ; PCDHGB4 ; |
| ROSE Proximal | PCDHGC5 ; PCDHGC3 ; LOC100505658 ; PCDHGC4 ; |
| ROSE Closest | PCDHGC5 ; |
| Lasso | ; |
| PreSTIGE | ; |
| ABC | ; |
| BETA | ; |