SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200323
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr4:38662985-38687977
Size: 24992
Super-enhancer rank 323
Number of SE elements: 6
ChIP density(Case|Control): 29453.072|2596.6688
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KLF3-AS1 ;
ROSE Overlap KLF3-AS1 ; KLF3 ;
ROSE Proximal ;
ROSE Closest KLF3-AS1 ;
Lasso ;
PreSTIGE ;
ABC KLF3 ; KLF3-AS1 ; TLR1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200323 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers