SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200296
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr19:2488637-2550199
Size: 61562
Super-enhancer rank 296
Number of SE elements: 17
ChIP density(Case|Control): 33563.6024|4986.522
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GADD45B ;
ROSE Overlap GNG7 ;
ROSE Proximal GADD45B ; LMNB2 ;
ROSE Closest GADD45B ;
Lasso ;
PreSTIGE ;
ABC GADD45B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200296 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers