SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_170200279
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr12:89345764-89355504
Size: 9740
Super-enhancer rank 279
Number of SE elements: 2
ChIP density(Case|Control): 30276.79|877.574
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DUSP6 ;
ROSE Overlap DUSP6 ;
ROSE Proximal DUSP6 ;
ROSE Closest DUSP6 ;
Lasso ;
PreSTIGE ;
ABC TMTC3 ; CEP290 ; C12orf29 ; KITLG ; LOC728084 ; GALNT4 ; POC1B ; POC1B-GALNT4 ; LOC105369891 ; ATP2B1-AS1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200279 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers