SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200255
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr17:40281676-40338597
Size: 56921
Super-enhancer rank 255
Number of SE elements: 13
ChIP density(Case|Control): 35086.1044|4314.6118
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RARA ;
ROSE Overlap WIPF2 ; RARA ; CDC6 ;
ROSE Proximal RARA-AS1 ; RARA ; GJD3 ;
ROSE Closest RARA ;
Lasso ;
PreSTIGE ;
ABC HCRT ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200255 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers