SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200253
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr12:46363865-46386595
Size: 22730
Super-enhancer rank 253
Number of SE elements: 5
ChIP density(Case|Control): 32810.755|2000.24
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC38A2 ;
ROSE Overlap SLC38A2 ; LOC100288798 ;
ROSE Proximal SLC38A2 ; LOC100288798 ;
ROSE Closest SLC38A2 ;
Lasso ;
PreSTIGE ;
ABC SCAF11 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200253 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers