SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200227
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr3:49442470-49504972
Size: 62502
Super-enhancer rank 227
Number of SE elements: 14
ChIP density(Case|Control): 38294.9754|5337.6708
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DAG1 ;
ROSE Overlap DAG1 ;
ROSE Proximal DAG1 ; AMT ; BSN ; NICN1 ; TCTA ; BSN-AS2 ; RHOA ;
ROSE Closest DAG1 ;
Lasso ;
PreSTIGE ;
ABC RHOA ; TCTA ; AMT ; NICN1 ; DAG1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200227 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers