SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200217
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr12:65880141-65901580
Size: 21439
Super-enhancer rank 217
Number of SE elements: 1
ChIP density(Case|Control): 37237.3991|3376.6425
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100129940 ;
ROSE Overlap LOC100129940 ; HMGA2 ;
ROSE Proximal ;
ROSE Closest LOC100129940 ;
Lasso ;
PreSTIGE ;
ABC MSRB3 ; LOC105369187 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200217 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers