SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200170
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr11:9354587-9413021
Size: 58434
Super-enhancer rank 170
Number of SE elements: 18
ChIP density(Case|Control): 47191.2984|6141.4134
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IPO7 ;
ROSE Overlap IPO7 ;
ROSE Proximal ZNF143 ; TMEM41B ; LOC644656 ; SNORA23 ;
ROSE Closest IPO7 ;
Lasso ;
PreSTIGE ;
ABC TMEM41B ; IPO7 ; SBF2-AS1 ; SWAP70 ; WEE1 ; ZNF143 ; TMEM9B ; DENND5A ; LOC644656 ; PPFIBP2 ; CYB5R2 ; EIF3F ; LMO1 ; STK33 ; RPL27A ; LOC102724784 ; ST5 ; AKIP1 ; C11orf16 ; TMEM9B-AS1 ; LYVE1 ; LOC440028 ; LOC101928008 ; SBF2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200170 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers