SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170200068
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 KI1_ChIP_Fig4
Genomic region: chr13:45139999-45293154
Size: 153155
Super-enhancer rank 68
Number of SE elements: 42
ChIP density(Case|Control): 81861.3475|15912.8045
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KCTD4 ;
ROSE Overlap KCTD4 ; GTF2F2 ;
ROSE Proximal TPT1-AS1 ; TPT1 ; LOC101929259 ; SNORA31 ; RNU6-69P ;
ROSE Closest KCTD4 ;
Lasso ;
PreSTIGE ;
ABC TSC22D1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170200068 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers