Super-enhancer overview
| SE ID: | SE_02_170200028 |
| Species: | Human |
| Data source: | NCBI GEO/SRA |
| Biosample type: | Cell line |
| Tissue type: | colon |
| Biosample name: | HCT116 KI1_ChIP_Fig4 |
| Genomic region: | chr17:57852209-57956170 |
| Size: | 103961 |
| Super-enhancer rank | 28 |
| Number of SE elements: | 27 |
| ChIP density(Case|Control): | 112153.1268|12246.6058 |
| Genome browser: | 
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Super-enhancer annotation
eQTL
eRNA1~5
5~10
10~MAX
Super-enhancer associated genes
| Strategies/Algorithm | Gene name |
| The closest active: | CUEDC1 ; |
| ROSE Overlap | CUEDC1 ; |
| ROSE Proximal | MRPS23 ; VEZF1 ; |
| ROSE Closest | CUEDC1 ; |
| Lasso | ; |
| PreSTIGE | ; |
| ABC | C17orf64 ; WFDC21P ; LOC105371849 ; HEATR6 ; LOC101927755 ; RNFT1 ; RPS6KB1 ; TUBD1 ; GDPD1 ; LINC01476 ; PTRH2 ; DHX40 ; CLTC ; VMP1 ; SMG8 ; APPBP2 ; YPEL2 ; TRIM37 ; PPM1D ; USP32 ; BCAS3 ; LOC101927855 ; TSPOAP1 ; TSPOAP1-AS1 ; MTMR4 ; SEPT4-AS1 ; SEPT4 ; C17orf47 ; TEX14 ; RAD51C ; SKA2 ; PRR11 ; C17orf82 ; LOC101927666 ; LPO ; MKS1 ; EPX ; DYNLL2 ; OR4D1 ; |
| BETA | ; |