SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170100348
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 parental_ChIP_Fig4
Genomic region: chr9:127522183-127575734
Size: 53551
Super-enhancer rank 348
Number of SE elements: 8
ChIP density(Case|Control): 30117.0824|3598.6272
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FAM129B ;
ROSE Overlap FAM129B ;
ROSE Proximal STXBP1 ;
ROSE Closest FAM129B ;
Lasso RPL12 ; SLC2A8 ; ST6GALNAC6 ; FAM129B ; STXBP1 ; PTRH1 ; LRSAM1 ;
PreSTIGE ;
ABC RPL35 ; WDR38 ; OLFML2A ; NR6A1 ; ARPC5L ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170100348 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers