SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170100230
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 parental_ChIP_Fig4
Genomic region: chr19:49637547-49647883
Size: 10336
Super-enhancer rank 230
Number of SE elements: 3
ChIP density(Case|Control): 33787.3504|811.376
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SCAF1 ;
ROSE Overlap RRAS ; SCAF1 ;
ROSE Proximal IRF3 ; CPT1C ; MIR5088 ; BCL2L12 ; PRR12 ; PRMT1 ; ADM5 ;
ROSE Closest SCAF1 ;
Lasso IRF3 ; SCAF1 ; CPT1C ; FUZ ; PRRG2 ; PRMT1 ; ADM5 ; NOSIP ; ALDH16A1 ; RPL13A ; PRR12 ; BCL2L12 ; AKT1S1 ; RCN3 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170100230 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers