SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_170100229
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 parental_ChIP_Fig4
Genomic region: chr22:50281373-50307707
Size: 26334
Super-enhancer rank 229
Number of SE elements: 6
ChIP density(Case|Control): 34276.3344|1235.0646
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PLXNB2 ;
ROSE Overlap PLXNB2 ;
ROSE Proximal PPP6R2 ; MAPK11 ; TUBGCP6 ; DENND6B ; HDAC10 ; MAPK12 ;
ROSE Closest PLXNB2 ;
Lasso ODF3B ; MOV10L1 ; TRABD ; SCO2 ; DENND6B ; KLHDC7B ; ARSA ; ADM2 ; MAPK8IP2 ; PLXNB2 ; MAPK11 ; LMF2 ; MAPK12 ; HDAC10 ; TUBGCP6 ; PANX2 ; PPP6R2 ; TYMP ; SELO ; SBF1 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170100229 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers