SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_170100216
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116 parental_ChIP_Fig4
Genomic region: chr10:103887782-103919554
Size: 31772
Super-enhancer rank 216
Number of SE elements: 12
ChIP density(Case|Control): 38876.2192|4721.3192
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: OBFC1 ;
ROSE Overlap OBFC1 ;
ROSE Proximal SLK ; SH3PXD2A ;
ROSE Closest OBFC1 ;
Lasso SH3PXD2A ; COL17A1 ; SLK ; OBFC1 ;
PreSTIGE ;
ABC LDB1 ; PPRC1 ; NOLC1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_170100216 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers