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Super-enhancer overview

SE ID: SE_02_169300940
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Placenta
Biosample name: CT27 EVT_D8, ChIP-seq, rep1
Genomic region: chr19:18314351-18324463
Size: 10112
Super-enhancer rank 940
Number of SE elements: 1
ChIP density(Case|Control): 36511.3984|1465.2288
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LSM4 ;
ROSE Overlap LSM4 ;
ROSE Proximal MIR3188 ; JUND ; KIAA1683 ; PGPEP1 ;
ROSE Closest LSM4 ;
Lasso ;
PreSTIGE ;
ABC LOC102725254 ; RAB3A ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_169300940 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers