SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_169300896
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Placenta
Biosample name: CT27 EVT_D8, ChIP-seq, rep1
Genomic region: chr10:103440646-103455320
Size: 14674
Super-enhancer rank 896
Number of SE elements: 4
ChIP density(Case|Control): 37556.6356|1219.4094
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CALHM2 ;
ROSE Overlap PDCD11 ; CALHM1 ; CALHM2 ;
ROSE Proximal MIR1307 ; CALHM2 ; USMG5 ; CALHM3 ; NEURL1 ;
ROSE Closest CALHM2 ;
Lasso ;
PreSTIGE ;
ABC FBXW4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_169300896 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers