SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_169300555
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Placenta
Biosample name: CT27 EVT_D8, ChIP-seq, rep1
Genomic region: chr4:140217253-140253684
Size: 36431
Super-enhancer rank 555
Number of SE elements: 8
ChIP density(Case|Control): 54533.5639|4309.7873
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SCOC ;
ROSE Overlap ;
ROSE Proximal SCOC ;
ROSE Closest SCOC ;
Lasso ;
PreSTIGE ;
ABC NDUFC1 ; NAA15 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_169300555 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers