SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_169300535
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Placenta
Biosample name: CT27 EVT_D8, ChIP-seq, rep1
Genomic region: chr1:25874656-25895542
Size: 20886
Super-enhancer rank 535
Number of SE elements: 6
ChIP density(Case|Control): 53280.186|2224.359
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PAQR7 ;
ROSE Overlap STMN1 ;
ROSE Proximal AUNIP ; MIR3917 ; PAQR7 ; STMN1 ;
ROSE Closest PAQR7 ;
Lasso ;
PreSTIGE ;
ABC LDLRAP1 ; SELENON ; MAN1C1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_169300535 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers