SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_169300459
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Placenta
Biosample name: CT27 EVT_D8, ChIP-seq, rep1
Genomic region: chr6:3739352-3760162
Size: 20810
Super-enhancer rank 459
Number of SE elements: 9
ChIP density(Case|Control): 58553.097|2374.421
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PXDC1 ;
ROSE Overlap PXDC1 ;
ROSE Proximal ;
ROSE Closest PXDC1 ;
Lasso ;
PreSTIGE ;
ABC PXDC1 ; FAM50B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_169300459 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers