SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_169300358
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Placenta
Biosample name: CT27 EVT_D8, ChIP-seq, rep1
Genomic region: chr2:43036872-43088236
Size: 51364
Super-enhancer rank 358
Number of SE elements: 11
ChIP density(Case|Control): 70409.7712|5742.4952
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC102723854 ;
ROSE Overlap LOC102723854 ;
ROSE Proximal ;
ROSE Closest LOC102723854 ;
Lasso ;
PreSTIGE ;
ABC LINC01914 ; PKDCC ; EML4 ; LOC102723824 ; COX7A2L ; MTA3 ; HAAO ; LINC01819 ; ZFP36L2 ; LINC01126 ; THADA ; PLEKHH2 ; C1GALT1C1L ; DYNC2LI1 ; C2orf91 ; KCNG3 ; LRPPRC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_169300358 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers